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workshop

Online course - NGS - Quality Control, Alignment, Visualisation

In this module, we will introduce the most used sequencing technologies and explain their concepts. Using different datasets, we will practice quality control, alignment of reads to a reference genome and visualize the output. This course is intended for life scientists who are already dealing with NGS data and would like to be able to start analysing them.

Application deadline: 01 April 2024

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Course at Milano, Italy: Metabolomics Approaches for ‘One Health’

This workshop focuses on experimental design and sample preparation matrix enabling junior and senior scientists to apply metabolomics approaches to a research-based context. Attendees will be guided through mass spectrometry-based experiment designs, learning about cutting-edge equipment and different technical procedures for metabolomics.

Application deadline: 30th April 2024

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Introduction to g:Profiler - 24.05.2024- Registration OPEN

This workshop provides a comprehensive introduction to g:Profiler, a tool designed for functional enrichment analysis, gene ID conversion, and orthology mapping, and requires no prior knowledge. Specifically intended for beginners, the session emphasizes efficient usage of g:Profiler for mapping genes to known functional information sources and identifying statistically significantly enriched terms.

Bring your own DMP workshop - 1.03.2024, Tartu - Invite only

According to the Estonian Research Council funding agreement, all the projects that have started in 2022 have to submit a data management plan (DMP) within the first six months. Since this will be new for many researchers, ELIXIR Estonia will do a data management writing course. During the workshop, we will discuss the different aspects of the DMP and give more practical advice. There will be 3-4 30-minute writing sessions where you can write your DMP. Also, if you have any questions, the organiser will help you as best as they can.

Bring your own DMP workshop - 8.03.2024, Tartu - Invite only

According to the Estonian Research Council funding agreement, all the projects that have started in 2022 have to submit a data management plan (DMP) within the first six months. Since this will be new for many researchers, ELIXIR Estonia will do a data management writing course. During the workshop, we will discuss the different aspects of the DMP and give more practical advice. There will be 3-4 30-minute writing sessions where you can write your DMP. Also, if you have any questions, the organiser will help you as best as they can.

Bring your own DMP workshop - 15.03.2024, Tartu - Invite only

According to the Estonian Research Council funding agreement, all the projects that have started in 2022 have to submit a data management plan (DMP) within the first six months. Since this will be new for many researchers, ELIXIR Estonia will do a data management writing course. During the workshop, we will discuss the different aspects of the DMP and give more practical advice. There will be 3-4 30-minute writing sessions where you can write your DMP. Also, if you have any questions, the organiser will help you as best as they can.

Bring your own DMP workshop - 22.03.2024, Tartu - Invite only

According to the Estonian Research Council funding agreement, all the projects that have started in 2022 have to submit a data management plan (DMP) within the first six months. Since this will be new for many researchers, ELIXIR Estonia will do a data management writing course. During the workshop, we will discuss the different aspects of the DMP and give more practical advice. There will be 3-4 30-minute writing sessions where you can write your DMP. Also, if you have any questions, the organiser will help you as best as they can.

OpenRefine andmete puhastamiseks - 03.05.2024, Tallinn - Kutsega

Praktiline töötuba, kus puhastame käsitsi sisestatud andmeid OpenRefine tarkvaraga. Esmalt käsitleme tabelarvutuse parimaid tavasid ning seejärel rakendame teadmisi OpenRefine’is. Koolitusel uurime OpenRefine tarkvara funktsionaalsusi: andmete puhastamist suuremate partiidena ja andmete ühtlustamist ühe hoobiga. Lisaks tutvustame võimalust laadida alla täiendavaid andmeid teistest andmebaasidest ja lisarakendusi.

g:Profiler: tööriist rikastatuse analüüsiks ja geeni ID konversiooniks- 17.05.2024, Tallinn - Kutsega

See töötuba tutvustab põhjalikult g:Profilerit - tööriista, mis on loodud funktsionaalse rikastamise analüüsi, geeni ID konversiooni ja ortoloogia kaardistamise jaoks ning ei eelda varasemaid teadmisi. See on suunatud peamiselt algajatele, rõhutades g:Profileri tõhusa kasutamise olulisust geenide kaardistamisel teadaolevatele funktsionaalsetele infoallikatele ja statistiliselt oluliste rikastatud terminite tuvastamisel.

Webinar by CECAM-HQ: Awareness in Data Management and Analysis for Industry and Research

Here we offer a two-day workshop with the primary aim of introducing participants to good enough practices for managing their data. On the first day, participants will learn about the basics of data management, good research practices, Common European Data Spaces, data management and governance in industry and data management plans. On the second day, participants will learn how to organise their data, how to make it FAIR, about electronic lab notebooks and how to make their computational results reproducible.

Registration deadline: February 25, 2024

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