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Crash Course on GDPR lecture - 01.11.2022

On the 1st of November 2022, ELIXIR-Estonia will hold a new data management online course: Crash Course on GDPR. The course will be held in English. 

When handling any kind of information that may help to identify a person, whether directly or indirectly, it must be handled with care. Particular attention should be put to collecting, processing, handling, and storing the data throughout the research process. This is meant for both textual, but also audio, video, and picture data. However, what does this mean for the researcher?

In this lecture, we will go over what GDPR and the Estonian Personal Data Protection Act say when dealing with personal data. Also, we will concentrate on what it means for the researcher working with this data and what he/she/they need to do to abide by these laws. This lecture will also cover the consent form and anonymization/pseudonymization processes. 

 

Information about the lecture

Lecture: 1st of November, 2022 at 14:15 (lecture, 12h)

Place: Delta Building, r1022 (Narva mnt 18), TARTU

Register: REGISTRATION CLOSED

Registration closes at 23:59 on 27.10.2022 or when the course gets full.

 

Learning outcomes for the participants: 

  • Understand the rules and regulations you have to abide by when dealing with sensitive data
  • Understand the safety measures you need to take into account when working with sensitive data
  • Understand the difference between anonymization and pseudonymization

 

F2F lectures will take place at the Delta building in Tartu (Narva mnt 18, Tartu).

We do ask you to register for the lecture responsibly. If you can’t attend the course, please let us know as soon as possible via email at elixir@ut.ee. 

Data Visualization I - Figures lecture - 25.10.2022

On the 25th of October 2022, ELIXIR-Estonia will hold a new data management online course: Data Visualization I - Figures. The course will be held in English. 

All researchers will be handling some data at some point in their careers. However, the data, in its regular shape (tables), is quite hard to grasp for most people. Especially if there is a lot of it, this is where data visualization comes to help. The idea is to bring forth the essential aspects of the data - to tell a story. However, just putting data into a graph or figure might do more harm than good. Not only could it give wrong conclusions, but it also might be misleading. This is one of the main reasons why the exact way how you visualize the data is fundamental. 

This lecture is part of a series of lectures and workshops called “Data visualization.” The first lecture will discuss why data visualization is important and what we should consider when designing it. This means what chart type to pick, how much information to include, what (and how) to highlight, and so on. 

 

Information about the lecture

Lecture: 25th of October, 2022 at 14:15 (lecture, 2h)

Place: Delta Building, r1022 (Narva mnt 18), TARTU

Register: REGISTRATION CLOSED

Registration closes at 23:59 on 20.10.2022 or when the course gets full.

 

Learning outcomes for the participants: 

  • Understands how to tell a story through data visualization
  • Knows what chart type to pick for different kinds of data
  • Knows what to pay attention to while designing a figure

 

F2F lectures will take place at the Delta building in Tartu (Narva mnt 18, Tartu).

We do ask you to register for the lecture responsibly. If you can’t attend the course, please let us know as soon as possible via email at elixir@ut.ee. 

How to Make Your Messy Data Usable? - Beginner and Advanced workshop - 04.10.2022/8.11.2022

On the 4th of October 2022, ELIXIR-Estonia will be holding a data management online course: How to Make Your Messy Data Usable? - PART 1. The course will be held in English. This course will be in two parts: a 1.5-hour online lecture on how to make a spreadsheet usable for other people held on the 4th of October at 10:00 in Zoom. The practical workshop on cleaning your messy data with OpenRefine software will be a video lecture you can follow in your own time. Additionally, we will hold 2 Q&A sessions in Zoom, where you can talk about any problems you encountered with the OpenRefine software.

This course will cover how to name your files and variables, version control, compile a data dictionary, and what to do with empty cells. In the second part of this lecture, OpenRefine software is introduced. With this, you can easily clean up the messy data. For the more practical aspect of using the OpenRefine software, we will share a video that will teach the basics. You can watch it anytime and do the lessons yourself. On two days (7.10 and 10.10), there will be a 1h slot (10:00-11:00) on Zoom, when you can come and ask any question you have regarding tables and OpenRefine software. 

 

Workshop information for PART 1: 

Lecture: 4th of October, 2022 at 10:00 (lecture, 1.5h)

Q&A session: 7.10 and 10.10 at 10:00 (Q&A, feedback, 1h)

Place: ZOOM (link will be sent to your email)

Register: CLOSED

Registration closes at 23:59 on 30.09.2022 or when the course gets full.

 

Learning outcomes for the participants: 

  • Compile a data table that abides by the FAIR Principles
  • Recognize what a clean table for others to use looks like
  • Explain how to use OpenRefine to clean the messy data


 

On the 8th of November 2022, ELIXIR-Estonia will be holding a data management online course: How to Make Your Messy Data Usable? - PART 2. The course will be held in English. This course will be in two parts: a 1-hour online lecture on what you can do in OpenRefine, including transformations, expressions, and extensions for the software, held on the 8th of November at 10:00 in Zoom. The practical workshop on how to transform your previously cleaned data with OpenRefine software will be a video lecture that you can follow in your own time. Additionally, we will hold 2 Q&A sessions in Zoom, where you can talk about any problems you encountered with the OpenRefine software.

This is a follow-up workshop for “How to make your messy data usable - PART 1”, where we talked about spreadsheets but also introduced the OpenRefine software. This course will explore the depths of OpenRefine software and see what else it can offer. This will include cleaning the data in bigger batches and unifying the data in one sweep. These include transformations and expressions. Additionally, we will introduce the possibility of downloading additional data from other databases and different extensions OpenRefine software has. 

You should have participated in the PART 1 workshop in order to register for the PART 2. 

 

Workshop information for PART 2: 

Lecture: 8th of November, 2022 at 10:00 (lecture, 1h)

Q&A session: 10.11 at 11:00 and 14.11 at 10:00 (Q&A, feedback, 1h)

Place: ZOOM (link will be sent to your email)

Register: CLOSED

Registration closes at 23:59 on 04.11.2022 or when the course gets full.

 

Learning outcomes for the participants: 

  • Understands what OpenRefine software can do with data
  • Knows what kind of transformations OpenRefine software supports
  • Knows how to write transformations and expressions in OpenRefine software

 

ONLINE workshops will be held through Zoom (the meeting link will be sent a couple of days before the workshop). 

We do ask you to register for the lecture responsibly. If you can’t attend the course, please let us know as soon as possible via email at elixir@ut.ee. 

Licensing Research Outputs lecture - 27.09.2022

On the 27th of September 2022, ELIXIR-Estonia will hold a new data management lecture: Licensing Research Outputs. The course will be held in English. 

While doing scientific research, you handle different kinds of research outputs, whether they are produced by you or by somebody else. So, how can you ensure that other people will give you credit when using your produced materials? And how will you know how exactly you can use the resources produced by others? This is a topic that copyright laws handle. 

This lecture will cover what copyright laws do, who has the rights to the materials, and how you can use them. Most of this information is protected with licenses, whether they are meant for figures, data, or software. This lecture will discuss what licenses to use for different materials and what each license covers (this means how people can use the materials). We will also show how exactly you can apply a license to your research outputs. 

 

Information about the lecture

Lecture: 27th of September, 2022 at 14:15 (lecture, 2h)

Place: Delta Building, r1022 (Narva mnt 18), TARTU

Register: CLOSED

Registration closes at 23:59 on 22.09.2022 or when the course gets full.

 

Learning outcomes for the participants: 

  • Knows what items need a license
  • Knows the restrictions on licensing a dataset
  • Knows what licenses to use for what research output
  • Knows how to apply a license to a research output practically

 

F2F lectures will take place at the Delta building in Tartu (Narva mnt 18, Tartu). 

Parking: You can park for free for 3h in the parking lot of the University of Tartu Academic Sports Club. 

We do ask you to register for the lecture responsibly. If you can’t attend the course, please let us know as soon as possible via email at elixir@ut.ee. 

Metadata and README lecture - 13.09.2022

On the 13th of September, 2022, ELIXIR-Estonia will hold a data management lecture: Metadata and README. This lecture will be held in English. 

In general, metadata is the descriptive information about your data. However, what exactly is metadata, and how much of it should be included with your data? 

Good metadata can make up for human fallibilities. People forget and misplace things and leave research projects with their knowledge of the research methodology and the data. Metadata ensures that we will be able to find the data, use it, preserve and reuse it in the future.

  • Finding Data: Metadata makes it much easier to find relevant data. Most searches are done using text (like a Google search), so formats like audio, images, and video are limited unless text metadata is available. Metadata also makes text documents easier to find because it explains exactly what the document is about.
  • Using Data: To use a dataset, researchers need to understand how the data is structured, definitions of terms used, how it was collected, and how it should be read.
  • Reusing Data: Researchers often want to reuse data collected for another project for their own project. The data still needs to be found and used, but often at a higher level of trust and understanding. Reusing data usually requires careful preservation and documentation of the metadata.

This means that the metadata provides additional information that helps data consumers better to understand the meaning and the structure of the dataset and to clarify other issues, such as rights and license terms, the organization that generated the data, data quality, data access methods, and the update schedule of datasets. Additionally, metadata also gives information about the data in general. What an actual metadata file includes varies between disciplines and types of data you are working with. However, the documentation for your data should contain the minimum information required to be able to reuse (or understand) the data described. 

In the lecture, we will be going over what exactly metadata is, the minimum information that should be included with each of the scientific results you are sharing, and how exactly you can write a README file. 

 

Information about the lecture

Dates: 13th of September, 2022 at 14:15 (lecture, 2h)

Place: Delta Building, r1022 (Narva mnt 18), TARTU

Register: CLOSED

Registration closes at 23:59 on 08.09.2022 or when the course gets full.

 

Learning outcomes for the participants: 

  • Understands the importance of good data management
  • Knows what metadata means in data files
  • Knows how to add metadata to the data
  • Knows what should be included in the README file
  • Can write a simple README file to accompany the data

 

F2F lectures will take place at the Delta building in Tartu (Narva mnt 18, Tartu). 

Parking: You can park for free for 3h in the parking lot of the University of Tartu Academic Sports Club. 

We do ask you to register for the lecture responsibly. If you can’t attend the course, please let us know as soon as possible via email at elixir@ut.ee. 

“How to make your messy data usable?” and “Metadata and README” courses REGISTRATION CLOSED

In the month of April, ELIXIR Estonia will be holding two data management online courses: "How to make your messy data usable?" on the 4th of April and "Metadata and README" on the 11th of April. Both of the courses will be held online, in Zoom, and in English. 

"How to make your messy data usable?" course will be in two parts: an 1.5 hour online lecture on how to make a spreadsheet usable for other people, held on the 4th of April at 10:00 in Zoom. The practical workshop on cleaning your messy data with OpenRefine software will be a video lecture that you can follow on your own time. Additionally, we will hold 3 Q&A sessions in Zoom, where you can talk about any problems you encountered with the OpenRefine software. In the "Metadata and README" lecture, we will be going over what exactly is metadata, what is the minimum information that should be included with each of the scientific results you are sharing and how exactly can you write a README file. 

 

In recent years, more attention is put on what researchers do with the data (and other resources) they produce. Especially in Europe, but also everywhere else. The main idea is that when researchers use taxpayers' money, the taxpayers themselves should also have access to the results, free of charge. This means that the research should be published in open access journals and data should be made publicly available. 

Good data management may help you with that, at least to make the process easier on the whole. If you think what to do with your data at the beginning and during the project and know what you plan to do with it at the end of the project, the process at the end will be easier. However, what is “good data management”, is up to debate. The FAIR Principles concentrates on making your data findable, accessible, interoperable and reusable, so this is a good start. And let’s be honest, some of these things you are probably already doing. 

 

How to make your messy data usable? course information

In this course, we will be going over how to name your files and variables, version control, compile a data dictionary, and what to do with empty cells. In the second part, OpenRefine software is introduced. With this, you can easily clean up the messy data. For the more practical aspect of using the OpenRefine software, I will share a video that will teach the basics. You can watch it anytime and do the lessons yourself. On three days (6.04, 7.04 and 8.04) there will be a 1h slot (10:00-11:00) on Zoom, when you can come and ask any question you have regarding tables and OpenRefine software. 

 

Information about the lecture:

Lecture: 4th of April, 2022 at 10:00 (lecture, 1.5h; in English)

Q&A session: 6.04, 7.04 and 8.04 at 10:00 (Q&A, feedback, 1h)

Place: ZOOM (link will be sent to your email)

Register: https://forms.gle/axZTA5rw3bPnKDww9 REGISTRATION IS CLOSED

Registration closes at 23:59 on 31.03.2022 or when the course gets full.

Learning outcomes: 

  • Compile a data table that abides by the FAIR Principles
  • Recognize what a clean table for others to use looks like
  • Explain how to use OpenRefine to clean the messy data

 

Metadata and REAME lecture information

In general, metadata is the descriptive information about your data. However, what exactly is metadata and how much of it should be included with your data? Good metadata can make up for human fallibilities. People forget and misplace things, and leave research projects taking their knowledge of the research methodology and the data with them. Metadata ensures that we will be able to find the data, use it, preserve and reuse it in the future.

  • Finding Data. Metadata makes it much easier to find relevant data. Most searches are done using text (like a Google search), so formats like audio, images, and video are limited unless text metadata is available. Metadata also makes text documents easier to find because it explains exactly what the document is about.
  • Using Data. To use a dataset, researchers need to understand how the data is structured, definitions of terms used, how it was collected, and how it should be read.
  • Reusing Data. Researchers often want to reuse data collected for another project for their own project. The data still needs to be found and used, but often at a higher level of trust and understanding. Reusing data often requires careful preservation and documentation of the metadata.

This means that the metadata provides additional information that helps data consumers to better understand the meaning of the dataset, its structure and to clarify other issues, such as rights and license terms, the organization that generated the data, data quality, data access methods and the update schedule of datasets. Additionally, metadata also gives information about the data in general. What an actual metadata file includes, varies between disciplines and types of data you are working with. However, the documentation for your data should contain the minimum information required to be able to reuse (or understand) the data described. 

In this lecture, we will be going over what metadata about your dataset should be included when you are sharing it. Additionally, we will also go over some examples on how to write a good README file. 

 

Information about the lecture:

Time: 11th of April, 2022 at 10:00 (lecture, 2h; in English)

Place: ZOOM (link will be sent to your email)

Register: https://forms.gle/YKvQyd8wrx2cvyYf9 REGISTRATION IS CLOSED

Registration closes at 23:59 on 31.03.2023 or when the course gets full.

Learning outcomes: 

  • Understands the importance of good data management
  • Knows what metadata means in data files
  • Knows how to add metadata to the data
  • Knows what should be included in the README file
  • Can write a simple README file to accompany the data

 

The FAIR Principles lecture - (registration closed)

On the 31st of January, 2022, ELIXIR-Estonia will be holding an online data management course: The FAIR Principles. This lecture will be a short overview about the principles and is part of a bigger data management course package.

In recent years, more attention is put on what researchers do with the data (and other resources) they produce. Especially in Europe, but also everywhere else. The main idea is that when researchers use taxpayers' money, the taxpayers themselves should also have access to the results, free of charge. This means that the research should be published in open access journals and data should be made publicly available. 

Good data management may help you with that, at least to make the process easier on the whole. If you think “how to manage your data” at the beginning and during the project and know what you plan to do with it at the end of the project, the process at the end will be easier. However, what is “good data management”, is up to debate. The FAIR Principles concentrates on making your data findable, accessible, interoperable and reusable, so this is a good start. And let’s be honest, some of these things you are probably already doing. 

 

In this course, we will be going over all the FAIR Principles and how they are applied in real life. This way, you will already know what to consider, while writing a grant, filling out your data management plan or doing your research. 

 

Information about the lecture

Date: 31.01.2022 

Language: English

Time: 10:15 - 13:45

Place: Zoom, link will be sent couple of days before the lecture

We ask you to register responsibly. If you can't attend the lecture, please let us know as soon as possible via email (elixir@ut.ee). 

Register: the registration is closed

Registration closes at 23:59 on 24.01.2022 or when the course gets full. A confirmation email wil be sent on the 25th of January, 2022. 

NB! Since this course is popular, we have added another session of the lecture, on 2nd of February, 2022. 

Register: the registration is closed

In order to not miss out a course next time, subscribe to our newsletter at https://lists.ut.ee/wws/subscribe/elixir.news?previous_action=edit_list_request

 

Learning outcomes: 

  • Understands the importance of a good data management
  • Knows what are the FAIR principles and what they mean
  • Knows how to implement FAIR principles throughout the research project
  • Knows where to get more information about the FAIR Principles

How to make your messy data usable? (registration closed)

On the 25th of November 2021, ELIXIR-Estonia will be holding a new data management online course: How to make your messy data usable. The course will be held in English. This course will be in two parts: an 1 hour online lecture on what makes a data table usable for other people held on 25th of November at 13:00 in Zoom. The practical workshop on cleaning your messy data with OpenRefine software will be a video lecture that you can follow in your own time. Additionally, we will hold 3 Q&A sessions in Zoom, where you can talk about any problems you encountered with the OpenRefine software.

 

More attention is put on what researchers do with the data (and other resources) they produce in recent years, especially in Europe, also in everywhere else. Since most of your data needs to be uploaded to a repository, it is essential that the data is tidy and other people understand and can easily read your data.  

In this course, we will be going over how to name your files and variables, version control, compile a data dictionary, and what to do with empty cells. In the second part, OpenRefine software is introduced. With this, you can easily clean up the messy data. For the more practical aspect of using the OpenRefine software, I will share a video that will teach the basics. You can watch it anytime and do the lessons yourself. On three days (29.11, 30.11 and 1.12) there will be a 1h slot (11:00-12:00) on Zoom, when you can come and ask any question you have regarding tables and OpenRefine software. 

 

Information about the lecture

Lecture: 25th of November, 2021 at 13:00 (lecture, 1h)

Q&A session: 29.11, 30.11 and 1.12 at 11:00 (Q&A, feedback, 1h)

Place: ZOOM (link will be sent to your email)

Register: registration closed

Registration closes at 23:59 on 24.11.2021 or when the course gets full.

Materials: https://doi.org/10.5281/zenodo.5720271 

 

Learning outcomes: 

  • Compile a data table that abides by the FAIR Principles
  • Recognize what a clean table for others to use looks like
  • Explain how to use OpenRefine to clean the messy data

The FAIR Principles Lecture (registration closed)

On the 27th of September, 2021 and on 14th of October, 2021, ELIXIR-Estonia will be holding a new data management course: The FAIR Principles. This lecture will be a short overview about the principles and is part of a bigger data management course package. The first course, on 27th of September, will be held in Estonian, and the second course, on 14th of October, will be held in English. 

 

The FAIR Principles Lecture 27th of September, 14:15-17:00 (in ESTONIAN) and 14th of October, 12:15-15:00 (in ENGLISH), Delta #1019

In recent years, more attention is put on what researchers do with the data (and other resources) they produce. Especially in Europe, but also everywhere else. The main idea is that when researchers use taxpayers' money, the taxpayers themselves should also have access to the results, free of charge. This means that the research should be published in open access journals and data should be made publicly available. 

Good data management may help you with that, at least to make the process easier on the whole. If you think “how to manage your data” at the beginning and during the project and know what you plan to do with it at the end of the project, the process at the end will be easier. However, what is “good data management”, is up to debate. The FAIR Principles concentrates on making your data findable, accessible, interoperable and reusable, so this is a good start. And let’s be honest, some of these things you are probably already doing. 

In this course, we will be going over all the FAIR Principles and how they are applied in real life. This way, you will already know what to consider, while writing a grant, filling out your data management plan or doing your research. 

 

Information about the lecture

Dates: 27.09.2021 in Estonian; 14.10.2021 in English

Time: 14:15 - 17:00 / 12:15 - 15:00

Place: Delta, Narva mnt 18, room 1019

Register: registration closed

Registration closes at 23:59 on 25.09.2021/12.10.2021 (for the Estonian/English lecture, respectively) or when it gets full.

Materials (ENG): https://doi.org/10.5281/zenodo.5572352

Materials (EST): https://doi.org/10.5281/zenodo.5533534

FAIR Flyer: https://doi.org/10.5281/zenodo.5769084

 

Learning outcomes: 

  • Understands the importance of a good data management
  • Knows what are the FAIR principles and what they mean
  • Knows how to implement FAIR principles throughout the research project
  • Knows where to get more information about the FAIR Principles

 

Data management courses held in the future (may be up to change): 

  • OpenRefine (October 2021)
  • Excel - how to make your data reusable (November 2021)
  • Data licensing (2022)
  • How to organise your files BYOD workshop (2022)
  • How to write a good metadata and README file (2022)
  • Personal data in data management (2022)